colonyCount: Identifies colonies on a scanned plate and returns number of...
In RobertJDReid/bobhelpR: Helper functions for analysis of Y1000 BLAST results
colonyCount R Documentation
Identifies colonies on a scanned plate and returns number of colonies
Description
Identifies colonies on a scanned plate and returns number of colonies
Usage
colonyCount(
img,
labelText = "",
maxArea = 800,
minArea = 25,
eccentricity = 0.6
)
Arguments
labelText
Text to display over image
maxArea
Maximum size cutoff to filter out image artefacts
minArea
Minimum size cutoff to filter non-colony objects
eccentricity
Cutoff for colony objects
image
A single plate image
RobertJDReid/bobhelpR documentation built on July 7, 2023, 9:02 a.m.
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| colonyCount | R Documentation |
Identifies colonies on a scanned plate and returns number of colonies
Description
Identifies colonies on a scanned plate and returns number of colonies
Usage
colonyCount(
img,
labelText = "",
maxArea = 800,
minArea = 25,
eccentricity = 0.6
)
Arguments
labelText |
Text to display over image |
maxArea |
Maximum size cutoff to filter out image artefacts |
minArea |
Minimum size cutoff to filter non-colony objects |
eccentricity |
Cutoff for colony objects |
image |
A single plate image |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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