README.md

In RomanSchefzik/SimBPDD: Simulating differential distributions for Beta-Poisson models

SimBPDD

Simulating differential distributions for Beta-Poisson models, in particular for single-cell RNA-sequencing (scRNA-seq) data

For more details on the methods and further information, please have a look at the accompanying paper: R. Schefzik (2021). SimBPDD: Simulating differential distributions in Beta-Poisson models, in particular for single-cell RNA-sequencing data. Annales Mathematicae et Informaticae, 53:283-298. Available at https://ami.uni-eszterhazy.hu/uploads/papers/finalpdf/AMI_53_from283to298.pdf

Installation

Prerequisites

Please make sure that you have the latest version of R installed. To use the SimBPDD package, it is required to install the following packages first: install.packages("statmod") install.packages("doParallel") install.packages("foreach")

Installation of the SimBPDD package

To install the SimBPDD package, run the following: install.packages("devtools") devtools::install_github("RomanSchefzik/SimBPDD")

The SimBPDD package can then be loaded using library(SimBPDD)

Usage

For the usage of the package and a detailed description of the functions, see the accompanying manual.

RomanSchefzik/SimBPDD documentation built on May 24, 2021, 1:28 a.m.