LRscore: Calculation of the LRscore
In SCA-IRCM/SingleCellSignalR: Cell Signalling Using Single Cell RNAseq Data Analysis
View source: R/cell_signaling.R
LRscore R Documentation
Calculation of the LRscore
Description
Calculation of the LRscore
Usage
LRscore(l, r, s)
Arguments
l
a value (or a vector) of the mean ligand expression in the
secreting cluster
r
a value (or a vector) of the mean receptor expression in the
receiving cluster
s
a value for scaling the score (usually the mean of the whole
read count table, the median or another similar value is possible),
must be over 0
Value
a value or a vector
Examples
l=1
r=9
s=5
LRscore(l,r,s)
SCA-IRCM/SingleCellSignalR documentation built on Dec. 11, 2022, 2:30 p.m.
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View source: R/cell_signaling.R
| LRscore | R Documentation |
Calculation of the LRscore
Description
Calculation of the LRscore
Usage
LRscore(l, r, s)
Arguments
l |
a value (or a vector) of the mean ligand expression in the secreting cluster |
r |
a value (or a vector) of the mean receptor expression in the receiving cluster |
s |
a value for scaling the score (usually the mean of the whole read count table, the median or another similar value is possible), must be over 0 |
Value
a value or a vector
Examples
l=1 r=9 s=5 LRscore(l,r,s)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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