markers: Markers
In SCA-IRCM/SingleCellSignalR: Cell Signalling Using Single Cell RNAseq Data Analysis
markers R Documentation
Markers
Description
Provides a table of cell type specific markers.
Usage
markers(category = c("immune", "tme", "melanoma", "bc"))
Arguments
category
one or several of the following "immune", "tme", "melanoma",
"bc"
Details
To use this function the user must have some knowledge about the
cell composition of her data set. For instance, if the dataset comes from a
breast cancer tumor, the user may select "bc", but also "immune" and "tme"
for cells of the microenvironment (see **Examples of use** in the User's
Guide vignette).
Value
The function returns a cell type specific markers table.
Examples
markers(c("immune","bc"))
SCA-IRCM/SingleCellSignalR documentation built on Dec. 11, 2022, 2:30 p.m.
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| markers | R Documentation |
Markers
Description
Provides a table of cell type specific markers.
Usage
markers(category = c("immune", "tme", "melanoma", "bc"))
Arguments
category |
one or several of the following "immune", "tme", "melanoma", "bc" |
Details
To use this function the user must have some knowledge about the cell composition of her data set. For instance, if the dataset comes from a breast cancer tumor, the user may select "bc", but also "immune" and "tme" for cells of the microenvironment (see **Examples of use** in the User's Guide vignette).
Value
The function returns a cell type specific markers table.
Examples
markers(c("immune","bc"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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