abraid_modes | model run modes available to runABRAID |
accuracy_stats | Functions to compute accuracy statistics for SDMs |
bgDistance | Randomly sample pseudo-absence points from within a given... |
bgSample | Randomly sample pseudo-absence points from a raster |
biasGrid | Create a bias grid from polygons using a gaussian moving... |
buildSP | Combine multiple shapefiles into a 'SpatialPolygons' object |
checkOccurrence | Quality control for input occurrence data |
checkRasters | Check that rasters confrom to a specified template |
combinePreds | Combine multiple prediction rasters |
Eastings_Northings | Converting Ordnance Survey grid references |
extent2poly | Convert an extent object into a polygon |
extractAdmin | Extract covariates by admin units |
extractBatch | Extract a batch of occurrence data. Takes account of synoptic... |
extractBhatt | Sample covariates according using a vector of three... |
featureDensity | Create a raster of the density of points and polygons |
gaussWindow | Generate a Gaussian window for smoothing rasters. |
getConditionalEffectPlots | Combine conditional effect plots for ensemble BRT runs |
getEffectPlots | Combine effect plots for ensemble BRT runs |
getGAUL | Extract GAUL codes for polygon occurrence data |
getRelInf | Summarize relative influence statistics for ensemble BRT runs |
getStats | Get model validation statistics for a model object created by... |
importRasters | Conveniently import raster files |
makePreds | Using the model output from 'runBRT', makes a prediction to a... |
masterMask | Create master mask from raster stack |
maxExtent | Create an extent object encompassing a list of corrdinate... |
nearestLand | Find nearest non-NA pixels to a set of points |
occurrence2SPDF | Convert occurrence dataframe to a SpatialPointsDataFrame |
osgb36 | British Ordnance Survey 1936 coordinate reference |
percCover | Calculate the percentage cover of raster classes in a... |
rasterPointCount | Calculate the number of points falling within each pixel in a... |
runABRAID | Run a disease risk-mapping workflow for a single disease |
runBRT | Run a boosted regression tree model using Sam's default... |
sdWeighted | Calculate weighted standard deviation of a vector. |
seegSDM-package | Streamlined functions for species distribution modelling in... |
seegSDM_synthetic_data | Synthetic data for demonstrating the seegSDM package |
selectLatestCovariates | Select the lastest layer for each covariate in a nested list. |
splitIdx | Get a list of indices to split up a vector for parallel... |
subsample | Sample a random subset of a dataframe containing presence and... |
tempStand | Temporal standardisation of occurrence data |
wgs84 | World Geodetic System 1984 coordinate reference |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.