getRelInf: Summarize relative influence statistics for ensemble BRT runs

In SEEG-Oxford/seegSDM: Streamlined Functions for Species Distribution Modelling in the SEEG Research Group

Description

Given models, a list of BRT model bootstraps (each element an output from runBRT), return a matrix of, and optionally boxplot (boxplot) the mean and quantiles (determined by quantiles) of the relative influence of each covariate in the BRT ensembles. The ... argument is passed to boxplot and allows some customisation of the plotting outputs.

Usage

getRelInf(models, plot = FALSE, quantiles = c(0.025, 0.975), ...)

Arguments

models	A list of BRT model bootstraps, each element being an output from runBRT.
plot	Whether to plot a box and whisker plot.
quantiles	Quantiles from which to calculate the uncertainty regions.
...	Additional arguments to be passe to boxplot.

Value

A matrix giving the means and quantiles of relative influence statistics for each covariate int he BRT ensemble.

See Also

summary.gbm, runBRT, boxplot

Examples

# TO DO

SEEG-Oxford/seegSDM documentation built on May 9, 2019, 11:08 a.m.