SPATData_EnvCov: Environmental Covariates Data Illustration
In SOLV-Code/SPATFunctions-Package: Functions for the Salmon Pattern Analysis Tool
Description
Usage
Format
Source
Description
A dataset containing observed recruits/spawner and various environmental covariates used in the 2019 Forecast for
Fraser River Sockeye Salmon (REF).IMPORTANT NOTE: Time series are not lined up based on plausible mechanism (e.g. sea surface temp may affect overall productivity during early ocean entry, but RpEff values are by brood year. Stock-specific offsets are required to align values properly. INCLUDE LIST!
Usage
1
Format
A data frame with 30 variables:
- year
year of observation for environmental covariates, brood year for productivity series
- aflow
April flow
- mflow
May flow
- jflow
June flow
- peak
Peak discharge Details TBI
- apesst
April Sea Surface Temp at Entrance Island Details TBI
- maesst
May Sea Surface Temp at Entrance Island Details TBI
- jnesst
June Sea Surface Temp at Entrance Island Details TBI
- apsst
April Sea Surface Temp at Pine Island Details TBI
- mapsst
May Sea Surface Temp at Pine Island Details TBI
- jnpsst
June Sea Surface Temp at Pine Island Details TBI
- jlpsst
July Sea Surface Temp at Pine Island Details TBI
- pdo
Pacific Decadal Oscillation Details TBI
- stn2js
Station 2 Details TBI
- stn2ja
Station 2 Details TBI
- Birk
Observed productivity of Birkenhead sockeye (Recruits/Effective Female)
- Bowr
Observed productivity of Bowron sockeye (Recruits/Effective Female)
- Chil
Observed productivity of Chilki sockeye (Recruits/Effective Female)
- Cult
Observed productivity of Cultus sockeye (Recruits/Effective Female)
- EStu
Observed productivity of Early Stuart sockeye (Recruits/Effective Female)
- Fenn
Observed productivity of Fennel sockeye (Recruits/Effective Female)
- Gate
Observed productivity of Gates sockeye (Recruits/Effective Female)
- Harr
Observed productivity of Harrison sockeye (Recruits/Effective Female)
- LShu
Observed productivity of Late Shuswap sockeye (Recruits/Effective Female)
- LStu
Observed productivity of Late Stuart sockeye (Recruits/Effective Female)
- Nadi
Observed productivity of Nadina sockeye (Recruits/Effective Female)
- Port
Observed productivity of Portage sockeye (Recruits/Effective Female)
- Ques
Observed productivity of Quesnel sockeye (Recruits/Effective Female)
- Raft
Observed productivity of Raft sockeye (Recruits/Effective Female)
- Scot
Observed productivity of Scotch sockeye (Recruits/Effective Female)
- Sey
Observed productivity of Seymour sockeye (Recruits/Effective Female)
- Stell
Observed productivity of Stellako sockeye (Recruits/Effective Female)
- Upit
Observed productivity of Upper Pitt sockeye (Recruits/Effective Female)
- Weav
Observed productivity of Weaver sockeye (Recruits/Effective Female)
...
Source
Include REF
SOLV-Code/SPATFunctions-Package documentation built on April 25, 2020, 12:59 a.m.
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Description Usage Format Source
Description
A dataset containing observed recruits/spawner and various environmental covariates used in the 2019 Forecast for Fraser River Sockeye Salmon (REF).IMPORTANT NOTE: Time series are not lined up based on plausible mechanism (e.g. sea surface temp may affect overall productivity during early ocean entry, but RpEff values are by brood year. Stock-specific offsets are required to align values properly. INCLUDE LIST!
Usage
1 |
Format
A data frame with 30 variables:
- year
year of observation for environmental covariates, brood year for productivity series
- aflow
April flow
- mflow
May flow
- jflow
June flow
- peak
Peak discharge Details TBI
- apesst
April Sea Surface Temp at Entrance Island Details TBI
- maesst
May Sea Surface Temp at Entrance Island Details TBI
- jnesst
June Sea Surface Temp at Entrance Island Details TBI
- apsst
April Sea Surface Temp at Pine Island Details TBI
- mapsst
May Sea Surface Temp at Pine Island Details TBI
- jnpsst
June Sea Surface Temp at Pine Island Details TBI
- jlpsst
July Sea Surface Temp at Pine Island Details TBI
- pdo
Pacific Decadal Oscillation Details TBI
- stn2js
Station 2 Details TBI
- stn2ja
Station 2 Details TBI
- Birk
Observed productivity of Birkenhead sockeye (Recruits/Effective Female)
- Bowr
Observed productivity of Bowron sockeye (Recruits/Effective Female)
- Chil
Observed productivity of Chilki sockeye (Recruits/Effective Female)
- Cult
Observed productivity of Cultus sockeye (Recruits/Effective Female)
- EStu
Observed productivity of Early Stuart sockeye (Recruits/Effective Female)
- Fenn
Observed productivity of Fennel sockeye (Recruits/Effective Female)
- Gate
Observed productivity of Gates sockeye (Recruits/Effective Female)
- Harr
Observed productivity of Harrison sockeye (Recruits/Effective Female)
- LShu
Observed productivity of Late Shuswap sockeye (Recruits/Effective Female)
- LStu
Observed productivity of Late Stuart sockeye (Recruits/Effective Female)
- Nadi
Observed productivity of Nadina sockeye (Recruits/Effective Female)
- Port
Observed productivity of Portage sockeye (Recruits/Effective Female)
- Ques
Observed productivity of Quesnel sockeye (Recruits/Effective Female)
- Raft
Observed productivity of Raft sockeye (Recruits/Effective Female)
- Scot
Observed productivity of Scotch sockeye (Recruits/Effective Female)
- Sey
Observed productivity of Seymour sockeye (Recruits/Effective Female)
- Stell
Observed productivity of Stellako sockeye (Recruits/Effective Female)
- Upit
Observed productivity of Upper Pitt sockeye (Recruits/Effective Female)
- Weav
Observed productivity of Weaver sockeye (Recruits/Effective Female)
...
Source
Include REF
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