plotCorrMatrix: plotCorrMatrix

In SOLV-Code/SPATFunctions-Package: Functions for the Salmon Pattern Analysis Tool

Description

This function generates a plot of a correlation matrix with various options. It is a wrapper function for the corrplot function from the corrplot package.

Usage

plotCorrMatrix(
  X,
  order = "original",
  n.groups = NA,
  label = NULL,
  plot.type = "circle"
)

Arguments

X	a correlation matrix, typically generated by a call to calcCorrMatrix or the base fn cor()
order	either "original" or "clustered" (for now, other options to be explored)
n.groups	number of groups to mark (applies only if order = "clustered"). NA produces default of round(n/3).
label	plot title, default is NULL
plot.type	layout options in corrplot package. Default is "circle". Other good options are "color" and "number"

Examples

M <- cor(mtcars)
plotCorrMatrix(M)

SOLV-Code/SPATFunctions-Package documentation built on April 25, 2020, 12:59 a.m.