xls2csv: xls2csv

In SOLV-Code/sdsynopsis: Salmon data extraction and summary

Description

Function to convert xlsx files with salmon data to csv files. This function uses the readxl package which is part of the tidyverse package.

Usage

xls2csv(
  file.in,
  file.out,
  db.type = "nuSEDS",
  sheet.read = 1,
  na.strings = c("", "NA")
)

Arguments

file.in	path to the input file
file.out	path to the output file
db.type	one of "nuSEDS","EPAD", or "MRP"
sheet.read	number specifying the tab to read in. Default is 1.
na.strings	vector with strings to be interpreted as NA. Default is c("","NA")

Examples

## Not run: xls2csv("test.xls","test.csv",db.type="nuSEDS")

SOLV-Code/sdsynopsis documentation built on April 29, 2020, 5:20 p.m.