cluster_meanlogFC: cluster_meanlogFC
In SShan2021/seuratExtension: Functions based on Seurat
Description
Usage
Arguments
Value
Examples
View source: R/cluster_meanlogFC.R
Description
(All) Tells you the average meanlogFC per cluster for each celltype
(weighted or not weighted )
Usage
1
cluster_meanlogFC(dataset, weight = "na")
Arguments
dataset
The output of identify_cluster(findtop_conservedmarkers())
weight
If you want to have weights, then weight = "weighted"
Value
A dataframe with the average meanlogFC per cluster for each celltype.
Examples
1
cluster_meanlogFC(clust_40pc_0.2_identifymarkers)
SShan2021/seuratExtension documentation built on Dec. 18, 2021, noon
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Description Usage Arguments Value Examples
View source: R/cluster_meanlogFC.R
Description
(All) Tells you the average meanlogFC per cluster for each celltype (weighted or not weighted )
Usage
1 | cluster_meanlogFC(dataset, weight = "na")
|
Arguments
dataset |
The output of identify_cluster(findtop_conservedmarkers()) |
weight |
If you want to have weights, then weight = "weighted" |
Value
A dataframe with the average meanlogFC per cluster for each celltype.
Examples
1 | cluster_meanlogFC(clust_40pc_0.2_identifymarkers)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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