lipa_expressionmarkers: lipa_expressionmarkers
In SShan2021/seuratExtension: Functions based on Seurat
Description
Usage
Arguments
Value
Examples
View source: R/lipa_expressionmarkers.R
Description
(LipaTg)Returns the expression per cluster of the feature you
want expressed sorted by avg2logFC
Usage
1
lipa_expressionmarkers(seuratobject, clusternumber)
Arguments
seuratobject
A seurat object.
clusternumber
Output of top_cluster.
Value
A dataframe of the avg2logFC of the feature you want expressed
in each cluster.
Examples
1
2
lipa.40pc_0.2 <- lipa_expressionmarkers(seuratobject =
plaque.combined_40pc_0.2, clusternumber = clust_40pc_0.2)
SShan2021/seuratExtension documentation built on Dec. 18, 2021, noon
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Description Usage Arguments Value Examples
View source: R/lipa_expressionmarkers.R
Description
(LipaTg)Returns the expression per cluster of the feature you want expressed sorted by avg2logFC
Usage
1 | lipa_expressionmarkers(seuratobject, clusternumber)
|
Arguments
seuratobject |
A seurat object. |
clusternumber |
Output of top_cluster. |
Value
A dataframe of the avg2logFC of the feature you want expressed in each cluster.
Examples
1 2 | lipa.40pc_0.2 <- lipa_expressionmarkers(seuratobject =
plaque.combined_40pc_0.2, clusternumber = clust_40pc_0.2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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