Man pages for SU-CompBio/SplicingFactory
Splicing Diversity Analysis for Transcriptome Data
| calculate_difference | Calculate splicing diversity changes between two conditions. |
| calculate_diversity | Main function for calculating splicing diversity |
| calculate_entropy | Calculate entropy for a vector of transcript-level expression... |
| calculate_fc | Calculate splicing diversity changes between two conditions. |
| calculate_gini | Calculate Gini coefficient for a vector of transcript-level... |
| calculate_inverse_simpson | #' Calculate inverse Simpson index for a vector of... |
| calculate_method | Calculate diversity values for a matrix of transcripts. |
| calculate_simpson | #' Calculate Simpson index for a vector of transcript-level... |
| label_shuffling | Calculate p-values using label shuffling. |
| tcga_brca_luma_dataset | TCGA Luminal A breast cancer dataset |
| wilcoxon | Calculate p-values using Wilcoxon rank sum test. |
