Files in SVA-SE/kilde
A package to perform Bayesian source attribution of Campylobacter in R
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENCE
Makefile
NAMESPACE
R/clean_data.R
R/dataformatting.R
R/dataformattingST.R
R/initializebugsST.R
R/initializemcmc.R
R/initializemcmcST.R
R/model.R
R/model_new.R
R/plot.R
R/runmcmc.R
R/runmcmcST.R
R/sample_data.R
R/summary.R
README.md
appveyor.yml
inst/extdata/dataformatting_ob.Rda
inst/extdata/sampledata.txt
inst/models/SA_ST_model.jag
inst/models/SA_allele_model.jag
inst/models/SA_allelemodel1.jag
inst/models/SA_allelemodel2.jag
inst/script.R
man/clean_data.Rd
man/dataformatting.Rd
man/dataformatting_ST.Rd
man/initialize_bugs.Rd
man/initialize_bugs_ST.Rd
man/initialize_mcmc.Rd
man/initialize_mcmc_ST.Rd
man/plot_history.Rd
man/plot_history.kilde_bugsmcmc.Rd
man/plot_history.kilde_bugsmcmc_ST.Rd
man/plot_history.kilde_rmcmc.Rd
man/plot_history.kilde_rmcmc_ST.Rd
man/plot_history_internal.Rd
man/plot_modelfit.Rd
man/plot_modelfit.kilde_bugsmcmc.Rd
man/plot_modelfit.kilde_bugsmcmc_ST.Rd
man/plot_modelfit.kilde_rmcmc.Rd
man/plot_modelfit.kilde_rmcmc_ST.Rd
man/plot_modelfit_ST_internal.Rd
man/plot_modelfit_internal.Rd
man/plot_population_attribution.Rd
man/plot_population_attribution.kilde_bugsmcmc.Rd
man/plot_population_attribution.kilde_bugsmcmc_ST.Rd
man/plot_population_attribution.kilde_rmcmc.Rd
man/plot_population_attribution.kilde_rmcmc_ST.Rd
man/plot_population_attribution_internal.Rd
man/plot_sample_attribution.Rd
man/plot_sample_attribution.kilde_bugsmcmc.Rd
man/plot_sample_attribution.kilde_bugsmcmc_ST.Rd
man/plot_sample_attribution.kilde_rmcmc.Rd
man/plot_sample_attribution.kilde_rmcmc_ST.Rd
man/plot_sample_attribution_internal.Rd
man/run_bugs.Rd
man/run_model.Rd
man/runmcmc.Rd
man/runmcmc_ST.Rd
man/sample_data.Rd
man/summary_internal.Rd
man/summary_kilde.Rd
man/summary_kilde.kilde_bugsmcmc.Rd
man/summary_kilde.kilde_bugsmcmc_ST.Rd
man/summary_kilde.kilde_rmcmc.Rd
man/summary_kilde.kilde_rmcmc_ST.Rd
man/summary_kilde_ST_internal.Rd
tests/OpenBUGS.R
tests/dataformatting.R
tests/readdata.R
tests/run_models.R
vignettes/attribution.Rmd
