profileInit: Light profile plot

In SWotherspoon/BAStag: Basic data processing for light based geolocation archival tags

Description

Initialize a light profile plot for plotting

Usage

profileInit(date, light, lmax = 64, xlab = "", main = "")

profileOverlay(
  date,
  light,
  threshold = NULL,
  point = FALSE,
  lag = TRUE,
  profile.col = defaultPalette[c(9, 5, 2)],
  threshold.col = defaultPalette[1],
  point.cex = 0.6
)

Arguments

date	a list of three sequences of sample times as POSIXct.
light	a list of three sequences of observed light levels
lmax	the maximum light level.
xlab	the x axis label.
main	the main title.
threshold	threshold levels to display
point	show individual observations as points?
lag	show profiles from neighbouring days
profile.col	the colours of the three light profiles.
threshold.col	the colour of the threshold markers.
point.cex	expansion factor for plot points.

Details

Sets up axes for drawing light profile plots.

SWotherspoon/BAStag documentation built on March 29, 2021, 2:47 a.m.