app_server | App server |
app_ui | App UI |
box_docs_color | Get color for documentation infobox |
box_meta_color | Get color for metadata infobox |
box_success_color | Get color for success rate infobox |
combine_all_metadata | Combine all metadata |
create_info_table | Create a nicer version of the file info |
filter_study_table_latest | Get study table with most recent metadata files |
fix_list | Fix character list |
format_date | Format date |
get_all_file_data | Get data for all files in table |
get_all_studies_table | Get synapse fileview |
get_data | Get data from file |
get_file_indices | Get file indices by metadataType |
get_file_indices_named | Get named file indices by metadataType |
get_file_indices_vector | Get file indices by metadataType |
get_info_box_ui | Get info box UI |
get_user_name | Get the user name |
has_auth_code | Has authorization code |
mod_synapse_oauth_ui | Synapse Oauth Module |
num_doc_files | Get the number of documentation files |
num_individuals | Get number of individuals |
num_manifest_files | Get number of files in manifest |
num_meta_files | Get the number of metadata files |
num_specimens | Get number of specimens |
oauth_process | Do the OAuth process |
percent_pass_validation | Percent of passing validation results |
reexports | Objects exported from other packages |
run_app | Run the Shiny application |
setup_global_oauth_vars | Sets up global OAuth variables |
validate_all_studies | Validate all studies |
validate_study | Validate a study |
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