This package provides methods to perform the statistical analysis and integration of omics datasets (e.g. in metabolomics and proteomics). These methods include the reading of datasets into an 'ExpressionSet' object ('reading'), quality control ('inspecting'), transformation ('transforming') of the dataMatrix, and univariate hypothesis testing ('hypotesting'). Multivariate analysis, feature selection and annotation, can be further performed with the 'ropls', 'biosigner' and 'biodb' packages, as detailed in the vignette.
Package details |
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Author | Etienne A. Thevenot <etienne.thevenot@cea.fr> |
Bioconductor views | Clustering MassSpectrometry Metabolomics Normalization StatisticalMethod |
Maintainer | Etienne A. Thevenot <etienne.thevenot@cea.fr> |
License | CeCILL |
Version | 0.4.2 |
URL | https://frama.link/etienne-thevenot |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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