met.ri: R-Index

In SebastianSosa/ANTs: Animal Network Toolkit Software

R-Index

Description

Calculates the node metric R-Index for all vertices.

Usage

met.ri(M, df = NULL, dfid = NULL)

Arguments

M	a square adjacency matrix, or a list of square adjacency matrices, or an output of ANT functions stat.ds.grp, stat.df.focal, stat.net.lk.
df	a data frame of same length as the input matrix or a list of data frames if argument M is a list of matrices or an output of ANT functions stat.ds.grp, stat.df.focal, stat.net.lk.
dfid	an integer or a string indicating the column with individual ids in argument df.

Details

R-Index of vertex i is the outstrength of node i divided by the met.strength of node i. This node metric aims to measure if an individual is more likely to receive or emit edges.

Value

• An integer vector of nodes R-index if argument df is NULL.

• A list of integer vectors of nodes R-index if argument M is a list of matrices and if argument df is NULL.

• A list of arguments df with a new column for nodes R-index titled 'R-index', if argument df is not NULL.

• A list of arguments df with a new column for nodes R-index if 1) argument df is not NULL, 2) argument M is an output from ANT functions stat.ds.grp, stat.df.focal, stat.net.lk for multiple matrices permutations, and 3) argument df is a list of data frames of same length as argument M. The name of the column of each element of the list is adapted according to argument value binary.

Author(s)

Sebastian Sosa, Ivan Puga-Gonzalez.

References

Liao, Z., Sosa, S., Wu, C., & Zhang, P. (2017). The influence of age on wild rhesus macaques' affiliative social interactions. American journal of primatology.

Sosa, S. (2018). Social Network Analysis, in: Encyclopedia of Animal Cognition and Behavior. Springer.

Examples

met.ri(sim.m)
head(sim.df)
met.ri(sim.m,df=sim.df)

SebastianSosa/ANTs documentation built on Sept. 25, 2023, 11:06 p.m.