perm.net.links.single: Matrix edge permutations

In SebastianSosa/ANTs: Animal Network Toolkit Software

Matrix edge permutations

Description

Permute matrix links.

Usage

perm.net.links.single(
  M,
  sym = FALSE,
  erase.diag = TRUE,
  nperm,
  progress = TRUE
)

Arguments

M	a square adjacency matrix .
sym	if true will vectorize only the lower triangle.
erase.diag	if true will not keep the diagonal of the matrix.
nperm	number of permutations wanted.
progress	a boolean indicating if the permutation process has to be visible.

Details

Edge permutations can be used to create random networks based on the observed network. Such permutation method is useful when analysing patterns of interactions such as assortativity.

Author(s)

Sebastian Sosa, Ivan Puga-Gonzalez.

SebastianSosa/ANTs documentation built on Sept. 25, 2023, 11:06 p.m.