vis.net: Network vizualisation

In SebastianSosa/ANTs: Animal Network Toolkit Software

Network vizualisation

Description

This function draw network.

Usage

vis.net(
  m,
  df,
  id,
  shape = NULL,
  size = NULL,
  color = NULL,
  label = NULL,
  n.col1 = "blue",
  n.col2 = "red",
  n.size = 1,
  e.width = 1,
  background = NULL,
  solver = NULL,
  n.shape = NULL,
  viewer = FALSE
)

Arguments

m	A square adjacency matrix.
df	A data frame of node attributes.
id	A string or integer indicating the column in the data frame with nodes ids.
shape	A string or integer indicating the column in the data frame according to the shape nodes must have.
size	A string or integer indicating the column in the data frame according to the size nodes must have.
color	A string or integer indicating the column in the data frame according to the color nodes must have.
label	A string or integer indicating the column in the data frame with the labels to use.
n.col1	A string indicating the first color value with which to start the color gradiant.
n.col2	A string indicating the last color value with which to end the color gradiant.
n.size	An integer indicating the size of nodes.
e.width	An integer indicating the width of edges.
background	A string of html color code.
solver	A string indicating the spatialization solver to use among the following options: 'barnesHut', 'repulsion', 'hierarchicalRepulsion', 'forceAtlas2Based'.
n.shape	An optional string vector if you want to set nodes' shapes. It must be unique values of same length as argument df in shape column.
viewer	A boolean indicating if plots must be displayed in R Studio viewer.

Value

The network representation in your browser.

Author(s)

Sebastian Sosa, Jérôme Pansanel

Examples

sim.df= met.eigen(sim.m,sim.df)
head(sim.df)
vis.net(sim.m, sim.df, id = 'id', shape = 'sex', n.shape = c('circle', 'triangle'),
  size = 'eigen', color = 'age')

SebastianSosa/ANTs documentation built on Sept. 25, 2023, 11:06 p.m.