API for Shians/CellBench
Construct Benchmarks for Single Cell Analysis Methods
| Global functions | |
|---|---|
| .bp_try_apply | Source code |
| .generate_tasks | Source code |
| .get_cache | Source code |
| .make_output | Source code |
| .onLoad | Source code |
| CellBench | Man page |
| CellBench-package | Man page |
| add_class | Source code |
| all_length_one | Source code |
| all_same_class | Source code |
| all_unique | Man page Source code |
| any_task_errors | Man page Source code |
| any_task_errors.benchmark_tbl | Man page Source code |
| apply_methods | Man page Source code |
| apply_methods.benchmark_tbl | Man page Source code |
| apply_methods.list | Man page Source code |
| apply_methods.tbl_df | Man page |
| apply_metrics | Man page |
| arrow_sep | Man page Source code |
| as_pipeline_list | Man page Source code |
| ascii_arrow | Source code |
| begin_benchmark | Man page |
| cache_method | Man page Source code |
| cellbench_case_study | Man page Source code |
| cellbench_file | Man page Source code |
| chain | Source code |
| check_class | Man page |
| clear_cached_datasets | Man page Source code |
| clear_cellbench_cache | Man page Source code |
| collapse_pipeline | Man page Source code |
| data_list | Man page Source code |
| df_to_tasks | Source code |
| drop_class | Source code |
| duration_seconds | Source code |
| factor_no_sort | Source code |
| filter_zero_genes | Man page Source code |
| fn_arg_seq | Man page Source code |
| fn_list | Man page Source code |
| get_data | Source code |
| if_empty_then | Source code |
| if_null_then | Source code |
| infer_names_from_dots | Source code |
| is.error | Source code |
| is.task_error | Man page Source code |
| is_all_of | Man page Source code |
| is_any_of | Man page |
| is_fn_list | Source code |
| is_one_of | Man page Source code |
| keep_high_count_cells | Man page Source code |
| keep_high_count_genes | Man page Source code |
| keep_high_var_genes | Man page Source code |
| load_all_data | Man page Source code |
| load_cell_mix_data | Man page Source code |
| load_mrna_mix_data | Man page Source code |
| load_sc_data | Man page Source code |
| make_combinations | Source code |
| mhead | Man page Source code |
| pipeline_collapse | Man page |
| print.fn_arg_seq | Man page Source code |
| print.task_error | Man page Source code |
| sample_cells | Man page Source code |
| sample_cols | Source code |
| sample_genes | Man page Source code |
| sample_rows | Source code |
| sample_sce_data | Man page |
| seq_ncol | Source code |
| seq_nrow | Source code |
| set_cellbench_bpparam | Man page Source code |
| set_cellbench_cache_path | Man page Source code |
| set_cellbench_threads | Man page Source code |
| simple_time | Source code |
| split_step | Man page Source code |
| strip_timing | Man page Source code |
| strip_timing.benchmark_timing_tbl | Man page Source code |
| summary.benchmark_tbl | Man page Source code |
| suppressMsgAndPrint | Source code |
| suppressPrint | Source code |
| time_methods | Man page Source code |
| time_methods.benchmark_timing_tbl | Man page Source code |
| time_methods.list | Man page Source code |
| unicode_arrow | Source code |
| unpack_timing | Man page Source code |
| unpack_timing.benchmark_timing_tbl | Man page Source code |
| vec_ptype_abbr.SingleCellExperiment | Source code |
| vec_ptype_abbr.remote_error | Source code |
| vec_ptype_abbr.task_error | Source code |
