Shicheng-Guo/edmr: Empirical differentially methylated regions calculation
Version 0.6.1

Comprehensive DMR analysis based on bimodal normal distribution model and weighted cost function for regional methylation analysis optimization. It captures the regional methylation modification by taking the spatial distribution of CpGs into account for the enrichment DNA methylation sequencing data so as to optimize the definition of the empirical regions. Combined with the dependent adjustment for regional p-value combination and DMR annotation.

Getting started

Package details

AuthorSheng Li
MaintainerSheng Li <[email protected]>
LicenseMIT
Version0.6.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Shicheng-Guo/edmr")
Shicheng-Guo/edmr documentation built on May 10, 2017, 1:36 p.m.