API for Shicheng-Guo/lyne
Modeling the dynamics of epigenetic marks along a cell lineage trees.

Global functions
Q2P Man page Source code
Q2QEig Man page Source code
QEig2P Man page Source code
QEig2Q Man page Source code
exampleLineageTree Man page Source code
gamma.make.rates Source code
getEdgeMatrix Man page Source code
logLikeAndRec Source code
lyne Man page
mcTreeLike Man page Source code
mcTreeLike.3states.GTR.bhom Man page Source code
mcTreeLike.3states.GTR.bhom.gamma Man page Source code
mcTreeLike.3states.GTR.bhom.gamma.inv Man page Man page Source code
mcTreeLike.3states.inv Man page Source code
onAttach Source code
onLoad Source code
optimize.mcTreeLike.3states.GTR.bhom Man page Source code
optimize.mcTreeLike.3states.GTR.bhom.gamma Man page Source code
optimize.mcTreeLike.3states.GTR.bhom.gamma.inv Man page Source code
pars2Q.3states.GTR Man page Source code
pars2QEig.3states.GTR Man page Source code
rcpp_likelihood Source code
recCol Source code
register_vignette_engines Source code
summarizeDat Source code
tree Man page
untangle_weave Source code
vig_engine Source code
vtangle_empty Source code
Shicheng-Guo/lyne documentation built on May 10, 2017, 1:36 p.m.