Description Usage Arguments Details Value
Get an example of a lineage tree. Given a lineage tree, get an edge matrix accordingly in bottom-up order (from leaves to root).
1 2 | exampleLineageTree()
getEdgeMatrix(graph,edges=FALSE)
|
graph |
igraph-class: Object containing the lineage tree. Needs to be a rooted tree. |
edges |
Logical: Should the result contain a column with the edge index in |
exampleLineageTree
returns the hematopoietic cell lineage tree from Bock et al. (2012).
getEdgeMatrix
Edge matrix in bottom-up order.
exampleLineageTree
List with two components: traversal
: igraph-class object containing cell lineage tree.
layout
: layout for plotting the tree.
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