convertID_result: Convert transcript IDs between different databases

In ShihChingYu/MRAT: Transcript Annotation Tool (TransAT): an R package for retrieving annotations for transcript specific genetic variants

Description

Preprocessing, converting and mapping

Format

A data frame with 3 rows and 17 variables:

refseq

character COLUMN_DESCRIPTION

Nucleotide_changes

character COLUMN_DESCRIPTION

CDS_start_loc

integer COLUMN_DESCRIPTION

ref

character COLUMN_DESCRIPTION

alt

character COLUMN_DESCRIPTION

chr

integer COLUMN_DESCRIPTION

ensembl_transcript_id

character COLUMN_DESCRIPTION

hgnc_symbol

character COLUMN_DESCRIPTION

start

integer COLUMN_DESCRIPTION

end

integer COLUMN_DESCRIPTION

width

integer COLUMN_DESCRIPTION

strand

integer COLUMN_DESCRIPTION

exon_id

character COLUMN_DESCRIPTION

exon_rank

integer COLUMN_DESCRIPTION

tx_start

integer COLUMN_DESCRIPTION

tx_end

integer COLUMN_DESCRIPTION

refsnp_id

character COLUMN_DESCRIPTION

ShihChingYu/MRAT documentation built on May 31, 2021, 12:58 p.m.