get_srameta_introns: merges srametadata with intron counts
In SiruoWang/srametadata: Getting and cleaning metadata from Sequence Read Archive (SRA)
Description
Usage
Arguments
Value
Examples
Description
saves srametaintrons.Rda with 20,172 entries
saves srametaintrons_subset.Rda with 2,969 entries
containing complete sex records from SRA metadata database
Usage
1
get_srameta_introns(file1, file2, file3)
Arguments
file1
file1 is a file containing intron counts on chrY for sra metadata database
file2
file2 is a file containing intron counts on whole chromosomes for sra metadata database
file3
file3 is a file containing all run accessions for sra metadata database
Value
return a list of dataframes: srametaintrons.Rda, srametaintrons_subset.Rda
Examples
1
get_srameta_introns("chrYintrons.txt","totalintrons.txt","run_accession.txt")
SiruoWang/srametadata documentation built on May 9, 2019, 1:47 p.m.
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Description Usage Arguments Value Examples
Description
saves srametaintrons.Rda with 20,172 entries saves srametaintrons_subset.Rda with 2,969 entries containing complete sex records from SRA metadata database
Usage
1 | get_srameta_introns(file1, file2, file3)
|
Arguments
file1 |
file1 is a file containing intron counts on chrY for sra metadata database |
file2 |
file2 is a file containing intron counts on whole chromosomes for sra metadata database |
file3 |
file3 is a file containing all run accessions for sra metadata database |
Value
return a list of dataframes: srametaintrons.Rda, srametaintrons_subset.Rda
Examples
1 | get_srameta_introns("chrYintrons.txt","totalintrons.txt","run_accession.txt")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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