reaction: Create SSM reaction

In StateSpaceModels/ssminr: ssminr

Description

Create a reaction for SSM

Usage

reaction(
  from,
  to,
  description = NULL,
  rate,
  accumulators = NULL,
  keywords = NULL
)

reaction_split(
  from,
  split_to,
  description = NULL,
  rate,
  accumulators = NULL,
  keywords = NULL
)

reaction_NGM(
  from,
  to,
  description = NULL,
  NGM,
  accumulators = NULL,
  keywords = NULL
)

Arguments

from, to	character, name of starting and ending state of the reaction
description	character, description of the reaction
rate	character, rate of the reaction
accumulators	character vector, one or more accumulators. In reaction_split, several accumulators can be defined for each split reaction using a list of vectors.
keywords	character vector
split_to	a vector whose names will be the to, and whose values will be the splitting probabilities between the to.
NGM	a list returned by define_NGM.

StateSpaceModels/ssminr documentation built on Feb. 7, 2020, 8:20 p.m.