run_stics: Running usm(s) from a/several directory(ies) or a/several...

In SticsRPacks/SticsOnR: Manage STICS Simulations Running the Executable or JavaStics,

Running usm(s) from a/several directory(ies) or a/several subdirectory(ies) named with usm name

Description

This function uses Stics directly through a system call

Usage

run_stics(
  stics_exe,
  workspace,
  usm = NULL,
  check = TRUE,
  verbose = FALSE,
  model_path = lifecycle::deprecated(),
  data_dir = lifecycle::deprecated(),
  usm_dir_names = lifecycle::deprecated(),
  check_exe = lifecycle::deprecated(),
  display = lifecycle::deprecated()
)

Arguments

stics_exe	Path of Stics the executable file
workspace	Path of the workspace containing the Stics (txt) input files
usm	Vector of USM names. Optional, if provided, the function runs only the given USMs. If not provided, the function runs all the USMs included in workspace.
check	Logical, T for checking the model executable, F otherwise
verbose	Logical value (optional), TRUE to display usms names, FALSE otherwise (default)
model_path	model_path is no longer supported, use stics_exe instead.
data_dir	data_dir is no longer supported, use workspace instead.
usm_dir_names	usm_dir_names is no longer supported, use usm instead.
check_exe	check_exe is no longer supported, use check instead.
display	display is no longer supported, use verbose instead.

Value

A list with usm names and execution error status

Examples

## Not run: 

# Specifying individual usm directories
run_stics("/home/username/bin/Stics", "/home/username/Work/SticsInputsDir")
run_stics("/home/username/bin/Stics", c(
  "/home/username/Work/SticsInputsDir1",
  "/home/username/Work/SticsInputsDir2"
))

# Specifying a parent directory of usms directories
# running one or several usms
run_stics("/home/username/bin/Stics",
"/home/username/Work/SticsInputsRootDir", "wheat")
run_stics(
  "/home/username/bin/Stics", "/home/username/Work/SticsInputsRootDir",
  c("wheat", "maize")
)
# running all usms
run_stics(
  "/home/username/bin/Stics", "/home/username/Work/SticsInputsRootDir",
)

## End(Not run)

SticsRPacks/SticsOnR documentation built on April 19, 2024, 9:47 p.m.