AcousticPSU | Add or remove acoustic PSUs and EDSUs |
addProcess | Add a StoX process to a model. |
BioticAssignment | Add or remove biotic hauls to/from assignment of hauls to... |
Bootstrap | Bootstrap the baseline model |
BootstrapData | Bootstrap data |
BootstrapNetCDF4 | Bootstrap the baseline model, write to NetCDF4 file |
BootstrapNetCDF4Data | BootstrapNetCDF4 data |
compareProjectToStoredOutputFiles | Function for comparing existing output files with the memory... |
compareProjectToStoredOutputFilesAll | Function for comparing existing output files with the memory... |
compareSweptAreaBaseline | Compare processes in a StoX 2.7 project and a copy in StoX >=... |
convertKeys2.7To3 | Convert keys of a 2.7 table to mimic the keys of StoX >= 3 |
convertStoX2.7To3 | Backward compabitibility actions: |
DataTypes | StoX data types of the RstoxFramework package |
duplicateProcess | Duplicate a StoX process. |
estimateTimeOfProcesses | Get process progress |
expandDT | Function to expand a data table so that the cells that are... |
expandProcess | Insert a StoX process after a specific process |
expression2list | Parse an R expression to a nested list: |
extractErrorIDs | Get IDs of bad Hauls or Samples |
findProcess | Find a processes from processName or functionName |
fixedWidthTable | Function to convert data.table to fixed width: |
general_arguments | General parameters of RstoxFramework. |
getActiveProcess | Get the active process. |
getAvaiableTemplates | Get avilable templates. |
getAvailableStoxFunctionNames | Function returning the names of the StoX functions available... |
getModelData | Get output data from processes of a StoX model |
getOfficialRstoxPackageVersion | Get certified Rstox package versions |
getProcess | Get the properties of a StoX process |
getProcessIDByOffset | Function to get process index from process ID |
getProcessIDFromFunctionName | Get process ID from function name |
getProcessIDFromProcessName | Function to get process ID from process name |
getProcessIndexFromProcessID | Function to get process index from process ID |
getProcessNameFromProcessID | Function to get process name from process ID |
getProcessOutput | Get output of a StoX process. |
getProcessOutputElements | Get the names of the output tables of a process |
getProcessOutputFiles | Function to get all process output memory files of a process: |
getProcessOutputFolder | Find the output folder of a process |
getProcessOutputTableNames | Get the names of the output tables of a process |
getProcessPlotOutput | Get output of a StoX process. |
getProcessTable | Functions to get the process table of a model. |
getProjectPaths | This function gets the paths defined by... |
getResamplableProcesses | Utility function for processPropertyFormats. This is exported... |
getResampleFunctions | Utility function for processPropertyFormats. This is exported... |
getRstoxFrameworkDefinitions | Get RstoxFramework definitions |
getSubPlotNames_PlotReportBootstrap | List PlotReportBootstrap plots |
getTemplate | Get a template. |
hasFileOutput | Does the process store output files?: |
initiateRstoxFramework | Definitions stored in the RstoxFramework environment |
json2expression | Function to convert from json to R expression: |
KnownDifferencesOldVersusNewStoX | Known differences between StoX 2.7 and the new StoX >= 3.0.0 |
list2expression | Function to convert from R list to R expression: |
ModelData | Model data generated by RstoxFramework |
modifyModel | Modify a model |
modifyProcess | Modify a process |
modifyProject | Modify a project |
modifyProjects | Modify multiple projects |
parseParameter | Function to parse a parameter coming from the GUI |
PlotReportBootstrap | Plot ReportBootstrapData |
PlotReportBootstrapData | Plot of reported Bootstrap data |
prependProcess | Prepend (append before) to a process by adding another... |
ProcessData | Process data used by RstoxFramework |
processPropertyFormats | Process property formats for RstoxFramework |
progressOfProcesses | Get process progress |
Projects | Create, open, close, save, saveAs, copy and delete a StoX... |
ProjectUtils | Utilities for projects. |
purgeOutput | Delete the contents of the output folder of a model. |
readModelData | Read the output files of a project |
readProcessOutputFile | Function to read a single process output file, possibly by... |
readStoX2.7OutputFile | Read output file from StoX 2.7 |
rearrangeProcesses | Rearrange processes of a StoX model. |
removeProcess | Remove a StoX process |
removeProcesses | Remove a StoX process |
ReportBootstrap | Report Bootstrap |
ReportBootstrapData | Reported Bootstrap data |
ReportBootstrapNetCDF4 | Report BootstrapNetCDF4 |
ReportBootstrapNetCDF4Data | Reported BootstrapNetCDF4 data |
ResampleBioticAssignmentByPSU | Resamples biotic PSUs |
ResampleBioticAssignmentByStratum | Resamples biotic PSUs |
ResampleMeanLengthDistributionData | Resamples biotic PSUs within Stratum in... |
ResampleMeanNASCData | Resamples acoustic PSUs |
ResampleMeanSpeciesCategoryCatchData | Resamples biotic PSUs within Stratum in... |
resetModel | Reset a StoX model. |
RstoxFramework | The Engine of StoX |
RstoxPackageStatus | Get package status of an Rstox package |
runFunction | General functions to run a function of an Rstox package,... |
runModel | Run a model of a StoX project |
runProcess | Run one process |
runProcesses | Run processes of a model. |
runProject | Run all models of a StoX project |
runProject_ReplaceAcousticFiles | Add a process DefineAcousticPSU with DefinitionMethod... |
runProjects | Run all models of a StoX project |
stopProcesses | Stop runProcesses(). |
stoxFunctionAttributes | A list of the attributes of the exported StoX functions: |
StoXGUI_interfaces | Get objects for use in the GUI |
Stratum | Stratum manipulation |
toJSON_Rstox | Convert to JSON |
unlistToDataType | Function to flatten a list of output datat and add names from... |
unReDoProject | Function to undo or redo, i.e., reset the current project... |
unzipProject | Function for unzipping a zipped StoX project |
writeActiveProcessID | This function has the primary use of writing the proided... |
write_list_as_tables_NetCDFF4 | Write/append a table/list of tables to NetCDF4 |
writeProjectDescription | Write the project description. |
writeProjectDescriptionJSON | Write project description to a file in json format |
writeStoxJsonSchema | Export StoX JSON schema |
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