DataTypes: StoX data types of the RstoxFramework package

DataTypesR Documentation

StoX data types of the RstoxFramework package

Description

StoX data types are the data types used to transfer data and information between processes in a StoX estimation model. The data types are divided into two types, the ModelData and ProcessData.

Details

The StoX output data can be written to file using the "Write output to file" process parameter in the StoX GUI which corresponds to the logical parameter fileOutput in the project description, which is set to TRUE by default. The output files are written differently based on the class of the output data from the process, with the following file types/file extensions:

Output data class StoX data types Output file type Output file extension
NetCDF4 Bootstrap NetCDF4 nc
Spatial (multi)polygon. R class: sf StratumPolygon GeoJSON geojson
Table (R class: data.table) ReadBiotic, StoxBiotic, NASC, etc Tab separated, NA as "NA" txt
Plot. R class: ggplot PlotReportBootstrap, etc Default: PNG (user choice) Default: png (user choice)
Character matrix WriteICESAcoustic, WriteICESBiotic, etc Comma separated, NA as "" csv
Vector WriteICESDatras, WriteICESDatsusc, etc Comma separated csv

Output data cannot be composed of multiple output data classes.


StoXProject/RstoxFramework documentation built on March 29, 2025, 12:11 p.m.