densityCI: densityCI

In SydneyBioX/scDC: Single cell differential composition analysis

densityCI

Description

Visualising the CI using density plots of proportions

Usage

densityCI(res, condition)

Arguments

res	results from scDC_noClustering, scDC_clustering function
condition	a vector indicate the condition associate the results

Value

Returns a data frame.

Author(s)

Yingxin Lin

Examples

## Loading example data

data("sim")

cellTypes = sim$sim_cellTypes
subject = sim$sim_subject
## Not run: 
res_scDC = scDC_noClustering(cellTypes, subject,
calCI = TRUE, calCI_method = c("BCa", "percentile"))
densityCI(res_scDC, c("cond1","cond1","cond2","cond2"))


## End(Not run)

SydneyBioX/scDC documentation built on Nov. 5, 2023, 2:10 a.m.