emulate_sensitivity: Emulate global sensitivity analysis output

In Sz-Tim/gbPopMod: Mechanistic species distribution model for glossy buckthorn (*Frangula alnus*)

Description

Emulate the output from a global sensitivity analysis using boosted regression trees with different interaction depths. Based on function described in Prowse et al 2016. Writes files to out/brt, creating /brt if necessary

Usage

emulate_sensitivity(sens.out, par.ls, n.cores = 1, n.sub = 10,
  td = c(1, 3, 5), resp, brt.dir = "out/brt/")

Arguments

sens.out	Dataframe of the parameter sets and simulation summaries; .$results from global_sensitivity
par.ls	List output from set_par_ranges with parameter to perform the sensitivity analysis on
n.cores	1 Number of cores for fitting subsample BRTs
n.sub	10 Number of subsamples for each emulation
td	c(1,3,5) Vector of regression tree interaction depths to test
resp	Which response summary to use (column name from sens.out)
brt.dir	"out/brt/" Directory to store boosted regression tree output

Value

Success message

Sz-Tim/gbPopMod documentation built on Dec. 7, 2020, 1:07 p.m.