PlotAnnotation: Plot Annotation

In THJlab/seqNdisplayR: A Tool for Customizable and Reproducible Plotting of Sequencing Coverage Data

Plot Annotation

Description

Internal function:

Usage

PlotAnnotation(
  annot_info,
  stranded,
  annot_cols,
  annotation_packing,
  plotted_region,
  plotted_strand,
  substrand,
  basic_plot_parameters,
  plot_start,
  plot_end,
  plot_width,
  bin_size,
  reverse_strand_direction,
  incl_feature_names,
  feature_names_above,
  incl_feature_brackets,
  incl_feature_shadings,
  feature_shading_colors,
  feature_shading_alpha,
  plot_width_parameters,
  plot_vertical_parameters,
  final_feature_text_org,
  windows_height,
  feature_font_size,
  annotation_panel_font_size,
  annot_panel_dist = 0.4,
  coords_tracks,
  font_colors,
  font_family,
  first_plot,
  scaling_factor,
  verbosity
)

Arguments

annot_info
stranded
annot_cols
annotation_packing
plotted_region
plotted_strand
substrand
basic_plot_parameters
plot_start
plot_end
plot_width
bin_size
reverse_strand_direction
incl_feature_names
feature_names_above
incl_feature_brackets
incl_feature_shadings
feature_shading_colors
feature_shading_alpha
plot_width_parameters
plot_vertical_parameters
final_feature_text_org
windows_height
feature_font_size
annotation_panel_font_size
annot_panel_dist
coords_tracks
font_colors
font_family
first_plot
scaling_factor
verbosity

Author(s)

SLA

THJlab/seqNdisplayR documentation built on Nov. 13, 2024, 10:36 a.m.