plot.seqNdisplayRSession: plot seq'N'display'R Session
In THJlab/seqNdisplayR: A Tool for Customizable and Reproducible Plotting of Sequencing Coverage Data
plot.seqNdisplayRSession R Documentation
plot seq'N'display'R Session
Description
Container for seqNdisplayR session information
Usage
## S3 method for class 'seqNdisplayRSession'
plot(session, ...)
Arguments
session
object of class seqNdisplayRSession
...
arguments passed to seqNdisplay. Should contain at least the argument feature or locus.
Details
see seqNdisplay for details. Session contains samples, colors, bigwigs, bigwig_dirs, parameters and annotation information.
Value
On-screen plot or pdf
Author(s)
MS (minor additions by SLA)
Examples
xl_fname = system.file('extdata', 'seqNdisplayR_sample_sheet_elaborate2.xlsx', package='seqNdisplayR')
session = LoadExcel(xl_fname, load_annotations =F)
class(session) # 'seqNdisplayRSession'
plot(session, feature='TAF1D')
THJlab/seqNdisplayR documentation built on Nov. 13, 2024, 10:36 a.m.
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| plot.seqNdisplayRSession | R Documentation |
plot seq'N'display'R Session
Description
Container for seqNdisplayR session information
Usage
## S3 method for class 'seqNdisplayRSession'
plot(session, ...)
Arguments
session |
object of class seqNdisplayRSession |
... |
arguments passed to seqNdisplay. Should contain at least the argument feature or locus. |
Details
see seqNdisplay for details. Session contains samples, colors, bigwigs, bigwig_dirs, parameters and annotation information.
Value
On-screen plot or pdf
Author(s)
MS (minor additions by SLA)
Examples
xl_fname = system.file('extdata', 'seqNdisplayR_sample_sheet_elaborate2.xlsx', package='seqNdisplayR')
session = LoadExcel(xl_fname, load_annotations =F)
class(session) # 'seqNdisplayRSession'
plot(session, feature='TAF1D')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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