plot.seqNdisplayRSession: plot seq'N'display'R Session

In THJlab/seqNdisplayR: A Tool for Customizable and Reproducible Plotting of Sequencing Coverage Data

plot seq'N'display'R Session

Description

Container for seqNdisplayR session information

Usage

## S3 method for class 'seqNdisplayRSession'
plot(session, ...)

Arguments

session	object of class seqNdisplayRSession
...	arguments passed to seqNdisplay. Should contain at least the argument feature or locus.

Details

see seqNdisplay for details. Session contains samples, colors, bigwigs, bigwig_dirs, parameters and annotation information.

Value

On-screen plot or pdf

Author(s)

MS (minor additions by SLA)

Examples

xl_fname = system.file('extdata', 'seqNdisplayR_sample_sheet_elaborate2.xlsx', package='seqNdisplayR')
session = LoadExcel(xl_fname, load_annotations =F)
class(session) # 'seqNdisplayRSession'
plot(session, feature='TAF1D')

THJlab/seqNdisplayR documentation built on March 29, 2024, 1:36 p.m.