logistfPrint: Print summaries from logistf
In TalhoukLab/biostatUtil: Utility Functions Used in Biostatistics Projects

logistfPrint

R Documentation

Print summaries from logistf

Description

Print nice summaries from objects returned by logistf.

Usage

logistfPrint(fit, digits = 3)

Arguments

`fit`	a fit object returned by `logistf`
`digits`	number of digits to round to

Details

There is a lot of raw output from logistf, and it is not easy to extract the coefficient table. This function provides a convenient wrapper to return summaries from logistf.

Value

A data frame with a row for each predictor and the following columns

`coef`	log odds ratio
`exp(coef)`	odds ratio
`lower`	lower confidence bound of odds ratio for specified level
`upper`	upper confidence bound of odds ratio for specified level
`p`	p-value

Author(s)

Samuel Leung, Derek Chiu

Examples

library(logistf)
data(sex2)
fit <- logistf(case ~ age + oc + vic + vicl + vis + dia, data = sex2,
alpha = 0.1)
summary(fit)

## Streamlined summary
logistfPrint(fit)

TalhoukLab/biostatUtil documentation built on April 14, 2025, 4:15 a.m.