TapscottLab/UCSCTrackTools: Tools to convert BAM files to BigWig and to create session track line

Tools to convert BAM files to bigWig files using coverage on genome positions. The session track line append the track lines for each bigWig file. Note that the preferred destinations for the coverage bigWig and junction bigBed files are /fh/fast/tapscott_s/pub/tapscott/ucsc/bigWig and /fh/fast/tapscott_s/pub/tapscott/ucsc/junction, respectively. The url portal is "http://tapscott:[email protected]:7007/ucsc/tapscott"

Getting started

Package details

AuthorChao-Jen Wong
MaintainerChao-Jen Wong <[email protected]>
LicenseArtistic-2.0
Version2.2.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("TapscottLab/UCSCTrackTools")
TapscottLab/UCSCTrackTools documentation built on Feb. 14, 2018, 12:11 a.m.