Files in TedCCLeung/CFH1
.Rbuildignore
.Rprofile
.gitignore
CFH1.Rproj
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/DE_discrete_matrix.R
R/corr_plot.R
R/data.R
R/dev.R
R/filter_CPM.R
R/get_DEgenes.R
R/get_TAIR.R
R/get_log2FC_mat.R
R/get_read_matrix.R
R/global.R
R/make_df_BF.R
R/make_summary.R
R/plot_volcano.R
R/run_edgeR.R
R/run_heatmap.R
R/run_master.R
R/utils-pipe.R
R/utils.R
data-raw/CFH1project_20220506/clusters_A.csv
data-raw/CFH1project_20220506/clusters_B.csv
data-raw/CFH1project_20220506/clusters_D.csv
data-raw/CFH1project_20220506/figures_20220505.ai
data-raw/CFH1project_20220506/heatmap_A.pdf
data-raw/CFH1project_20220506/heatmap_B.pdf
data-raw/CFH1project_20220506/heatmap_C.pdf
data-raw/CFH1project_20220506/heatmap_D.pdf
data-raw/CFH1project_20220506/result.xlsx
data-raw/CPM_table.tsv
data-raw/TMM_table.tsv
data-raw/df_BF.tsv
data-raw/gene_count_matrix.csv
data-raw/heatmap.pdf
data-raw/result.tsv
data-raw/transcript_count_matrix.csv
data-raw/volcano.pdf
data-raw/volcano_pif_single.pdf
data/gene_count_matrix.rda
data/transcript_count_matrix.rda
man/gene_count_matrix.Rd
man/get_TAIR.Rd
man/pipe.Rd
man/run_edgeR.Rd
man/transcript_count_matrix.Rd
renv.lock
renv/.gitignore
renv/activate.R
renv/settings.dcf
