Rename RGCCA classes and prefix them with "rgcca_".
Merge documentation of print functions.
Merge documentation of plot functions.
Environment variable TEST_SNAPSHOTS must be set to "TRUE" for snapshots to be evaluated.
NEWS.md
file to track changes to the package.Many differences have been introduced since the last version published on CRAN.
We list below the most important ones:
The function rgcca
is now the main entry point of the package.
Many well-known methods of the multiblock literature are now directly
available by setting the method
argument in the rgcca
function.
The list of methods can be found using the available_methods
function.
Arguments A
and C
of the rgcca
function are now deprecated. blocks
and connection
should be used instead.
Small utility functions are no longer exported.
Functions rgcca_transform
and rgcca_predict
have been added. They allow
applying fitted RGCCA models to project new subjects onto the learned subspaces
and make predictions of response blocks using caret
predictive models.
Functions rgcca_cv
and rgcca_permutation
have been added. They allow for
finding the best parameters of the models based on a cross-validation or
permutation criterion.
The function rgcca_bootstrap
has been added to evaluate the weights of a
model using a bootstrap procedure.
The function rgcca_stability
has been added to evaluate the stability of
the variable selection performed by SGCCA.
* Print and plot functions have been added for the outputs of functions
rgcca
, rgcca_cv
, rgcca_permutation
, rgcca_bootstrap
,
and rgcca_stability
.
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