norm_pheno: Mean-center and normalize phenotypes
In TheJacksonLaboratory/CAPE: Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice
norm_pheno R Documentation
Mean-center and normalize phenotypes
Description
This function is a wrapper for mean-centering
normalizing and standardizing the trait matrix.
in a data_obj.
Usage
norm_pheno(data_obj, mean_center = TRUE)
Arguments
data_obj
a Cape object
mean_center a logical value indicating whether the
traits should be mean centered. If FALSE, the traits
are only normalized.
mean_center
mean center
Value
the data object is returned. The pheno slot of
the data object will have normalized and/or mean-centered
traits. The function also preserves the original trait matrix
in a slot called raw_pheno.
TheJacksonLaboratory/CAPE documentation built on July 16, 2025, 9:16 p.m.
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| norm_pheno | R Documentation |
Mean-center and normalize phenotypes
Description
This function is a wrapper for mean-centering normalizing and standardizing the trait matrix. in a data_obj.
Usage
norm_pheno(data_obj, mean_center = TRUE)
Arguments
data_obj |
a |
mean_center |
mean center |
Value
the data object is returned. The pheno slot of the data object will have normalized and/or mean-centered traits. The function also preserves the original trait matrix in a slot called raw_pheno.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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