calc_m: Calculate m
In TheJacksonLaboratory/cape: Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice
calc_m R Documentation
Calculate m
Description
This function performs the reparameterization
step originally described in
Carter, G. W., Hays, M., Sherman, A. & Galitski, T.
Use of pleiotropy to model genetic interactions in a
population. PLoS Genet. 8, e1003010 (2012).
Usage
calc_m(markers, beta_m)
Arguments
markers
A vector of length two holding the
names of the markers being tested.
beta_m
The matrix of beta values from the
pairwise linear regression testing the interaction
between the markers.
Value
This function returns a matrix with one
row holding the m12 and m21 values as described
in Carter et al. 2012
TheJacksonLaboratory/cape documentation built on Feb. 12, 2024, 4:34 p.m.
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| calc_m | R Documentation |
Calculate m
Description
This function performs the reparameterization step originally described in Carter, G. W., Hays, M., Sherman, A. & Galitski, T. Use of pleiotropy to model genetic interactions in a population. PLoS Genet. 8, e1003010 (2012).
Usage
calc_m(markers, beta_m)
Arguments
markers |
A vector of length two holding the names of the markers being tested. |
beta_m |
The matrix of beta values from the pairwise linear regression testing the interaction between the markers. |
Value
This function returns a matrix with one row holding the m12 and m21 values as described in Carter et al. 2012
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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