Files in ThomasCarroll/soGGi
Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals
DESCRIPTION
LICENSE
NAMESPACE
R/allClasses.r
R/motifTools.R
R/peakTransforms.r
R/plots.R
R/soggi.R
build/vignette.rds
data/chipExampleBig.rda
data/datalist
data/ik_Example.rda
data/ik_Profiles.rda
data/pwmCov.rda
data/singleGRange.rda
inst/NEWS.Rd
inst/doc/soggi.R
inst/doc/soggi.Rnw
inst/doc/soggi.pdf
man/ChIPprofile.Rd
man/Ops.Rd
man/chipExampleBig.Rd
man/findconsensusRegions.Rd
man/groupByOverlaps.Rd
man/ik_Example.Rd
man/ik_Profiles.Rd
man/manipulateObjects.Rd
man/normalise.Rd
man/normaliseQuantiles.Rd
man/orientBy.Rd
man/plotRegion.Rd
man/pwmCov.Rd
man/pwmToCoverage.Rd
man/singleGRange.Rd
tests/testthat.R
tests/testthat/test_manipulations.R
tests/testthat/test_operations.r
tests/testthat/test_plotting.R
vignettes/soggi.Rnw
