barGIF | R Documentation |
The barGIF function creates a GIF showing the percentage of time spent per quadrant for a specific trial of one animal.
barGIF(
data,
id,
day,
trial,
centerx,
centery,
radius = 75,
platformx,
platformy,
platformradius = 7.5,
bar_colours = c("#F8766D", "#7CAE00", "#00BFC4", "#C77CFF"),
show_time = FALSE,
loop = FALSE,
width = 480,
height = 480,
fps = 10,
duration = 10,
frames = 100,
time_bins = 50,
theme_settings = NULL,
title = NA
)
data |
Data set containing at least following columns: "Time", "x", "y", "Animal", "Day", "Trial". "x" and "y" represent the coordinates (position) of the animal at a certain timepoint ("Time") during the trial. |
id |
ID of the animal |
day |
day number |
trial |
trial number |
centerx |
x coordinate of the center of the morris water maze (cm) |
centery |
y coordinate of the center of the morris water maze (cl) |
radius |
radius of the morris water maze (cm), default = 75 |
platformx |
x coordinate of the center of the platform (cm) |
platformy |
y coordinate of the center of the platform (cm) |
platformradius |
radius of the platform (cm), default = 7.5 |
bar_colours |
Colours of the four bars. Default = c("#F8766D","#7CAE00", "#00BFC4", "#C77CFF") |
show_time |
Show time-bins (s) as subtitle (ggplot). Default = FALSE |
loop |
Loop the animation, default = FALSE |
width |
Width of the animation (px), default = 480 |
height |
Height of the animation (px), default = 480 |
fps |
Frames per second of the animation, default = 10 |
duration |
Duration of the animation(s), default = 10 |
frames |
Number of frames in the animation, default = 100 |
time_bins |
Number of time-bins in the animation, default = 50 |
theme_settings |
Optional parameter that passes list of arguments to ggplot2's theme() function. |
title |
Add title to GIF. Default = NA |
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