auto_set_colorcode | Create color codes for groups. |
check_color_code | Check the validation of a color code dataframe |
chicken_generator | Chicken foot simulation data generator |
color_map | Assign color codes to samples |
color_map_Spectral | Spectral color map function |
color_mixer | Color mixer |
filter_coordinate | Coordinate projection filter |
filter_dtm | Distance to measure filter |
filter_eccen | Eccentricity filter |
filter_evaluate | Evaluate filter functions |
filter_gaussian | Gaussian density filter |
filter_Linf | L-infinity filter |
filter_name | Which filter function produces the filter? |
filter_pca | PCA filter |
filter_ref | Reference distance filter |
legend_node | Add legends to the generated graph |
load_network_h5 | Load a h5 file |
mapperEdges | mapperEdges function |
mapper.kmeans | Mapper function with multiple cluster methods (deprecated) |
mapper_shannon_index | Shannon index for Mapper |
mapper.sta | Mapper function with multiple cluster methods |
mapperVertices | mapperVertices function |
network_visualization | Generate graphs from results of Mapper |
null_remover | Remove NULL nodes in the graph |
pareto_opt | Find the pareto frontier |
print.filter | Print filter function name |
print.Pareto_frontier | Print Pareto frontier |
read_color_code | Read color codes from a given file |
ref_dist_nodewise | Nodewise topological distance to a node |
ref_dist_samplewise | Average samplewise topological distance to a group of nodes |
save_network_h5 | Save results into a h5 file |
simple_visNet | Simple graphs generation |
spread_measure | Spread measure function |
stat_summery | Create statistics summary of nodes |
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