Files in TianshuFeng/SemiMapper

Semi-supervised Topological Analysis

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE.md

Meta/vignette.rds

NAMESPACE

R/evaluation.R R/filters.R R/mapper.R R/mapper_vis.R R/simulation.R R/utils.R README.md

SemiMapper.Rproj

doc/my-vignette.R doc/my-vignette.Rmd

doc/my-vignette.html

docs/404.html

docs/LICENSE.html

docs/articles/STA.html

docs/articles/STA_files/figure-html/fig2-1.png

docs/articles/Shiny_app_instruction.html

docs/articles/figures/Node_summary.png

docs/articles/figures/categorical_color.png

docs/articles/figures/color_mixer.png

docs/articles/figures/continuous_color.png

docs/articles/figures/main_screen.png

docs/articles/figures/node_comparison.png

docs/articles/figures/node_summary_continuous.png

docs/articles/figures/open_h5.png

docs/articles/figures/settings.png

docs/articles/index.html

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/auto_set_colorcode.html

docs/reference/check_color_code.html

docs/reference/chicken_generator.html

docs/reference/color_map.html

docs/reference/color_map_Spectral.html

docs/reference/color_mixer.html

docs/reference/figures/Chichen_foot.png

docs/reference/figures/Illustrate.png

docs/reference/figures/Node_summary.png

docs/reference/figures/Open_h5.png

docs/reference/figures/Overview.png

docs/reference/figures/Res_chicken_foot.png

docs/reference/figures/categorical_color.png

docs/reference/figures/color_mixer.png

docs/reference/figures/continuous_color.png

docs/reference/figures/main_screen.png

docs/reference/figures/node_comparison.png

docs/reference/figures/node_summary_continuous.png

docs/reference/figures/settings.png

docs/reference/filter_Linf.html

docs/reference/filter_coordinate.html

docs/reference/filter_dtm.html

docs/reference/filter_eccen.html

docs/reference/filter_evaluate.html

docs/reference/filter_gaussian.html

docs/reference/filter_name.html

docs/reference/filter_pca.html

docs/reference/filter_ref.html

docs/reference/index.html

docs/reference/legend_node.html

docs/reference/load_network_h5.html

docs/reference/mapper.kmeans.html

docs/reference/mapperEdges.html

docs/reference/mapperVertices.html

docs/reference/mapper_shannon_index.html

docs/reference/network_visualization.html

docs/reference/null_remover.html

docs/reference/pareto_opt.html

docs/reference/print.Pareto_frontier.html

docs/reference/print.filter.html

docs/reference/read_color_code.html

docs/reference/ref_dist_nodewise.html

docs/reference/ref_dist_samplewise.html

docs/reference/save_network_h5.html

docs/reference/simple_visNet.html

docs/reference/spread_measure.html

docs/reference/stat_summery.html

inst/CITATION

inst/STA-app/app.R

inst/STA-app/chick_foot.csv

inst/STA-app/chick_foot.rds

inst/STA-app/example_descript.csv

inst/STA-app/example_descript.xlsx

inst/STA-app/rsconnect/shinyapps.io/tsfeng/STA-app.dcf

inst/STA-app/test.h5

inst/STA-app/test_h5.R man/auto_set_colorcode.Rd man/check_color_code.Rd man/chicken_generator.Rd man/color_map.Rd man/color_map_Spectral.Rd man/color_mixer.Rd

man/figures/Chichen_foot.png

man/figures/Illustrate.png

man/figures/Node_summary.png

man/figures/Open_h5.png

man/figures/Overview.png

man/figures/Res_chicken_foot.png

man/figures/categorical_color.png

man/figures/color_mixer.png

man/figures/continuous_color.png

man/figures/main_screen.png

man/figures/node_comparison.png

man/figures/node_summary_continuous.png

man/figures/settings.png

man/filter_Linf.Rd man/filter_coordinate.Rd man/filter_dtm.Rd man/filter_eccen.Rd man/filter_evaluate.Rd man/filter_gaussian.Rd man/filter_name.Rd man/filter_pca.Rd man/filter_ref.Rd man/legend_node.Rd man/load_network_h5.Rd man/mapper.kmeans.Rd man/mapper.sta.Rd man/mapperEdges.Rd man/mapperVertices.Rd man/mapper_shannon_index.Rd man/network_visualization.Rd man/null_remover.Rd man/pareto_opt.Rd man/print.Pareto_frontier.Rd man/print.filter.Rd man/read_color_code.Rd man/ref_dist_nodewise.Rd man/ref_dist_samplewise.Rd man/save_network_h5.Rd man/simple_visNet.Rd man/spread_measure.Rd man/stat_summery.Rd

pkgdown/_pkgdown.yml

vignettes/STA.Rmd vignettes/Shiny_app_instruction.Rmd

vignettes/figures/Chichen_foot.png

vignettes/figures/Illustrate.png

vignettes/figures/Node_summary.png

vignettes/figures/Open_h5.png

vignettes/figures/Overview.png

vignettes/figures/Res_chicken_foot.png

vignettes/figures/categorical_color.png

vignettes/figures/color_mixer.png

vignettes/figures/continuous_color.png

vignettes/figures/main_screen.png

vignettes/figures/node_comparison.png

vignettes/figures/node_summary_continuous.png

vignettes/figures/settings.png

TianshuFeng/SemiMapper documentation built on Sept. 16, 2022, 10:26 p.m.