Files in TobieSurette/gulf.manage

Southern Gulf Data Management Functions

.DS_Store

.Rbuildignore

.Rproj.user/C3D160F8/console06/INDEX001

.Rproj.user/C3D160F8/pcs/files-pane.pper

.Rproj.user/C3D160F8/pcs/source-pane.pper

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.Rproj.user/C3D160F8/rmd-outputs

.Rproj.user/C3D160F8/saved_source_markers

.Rproj.user/C3D160F8/sources/prop/1ED410F7

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.Rproj.user/shared/notebooks/patch-chunk-names

.Rproj.user/shared/notebooks/paths

.gitignore

DESCRIPTION

NAMESPACE

R/.DS_Store

R/as.scsset.scsbio.R R/check.R R/check.esonar.R R/check.key.R R/check.probe.R R/check.scsbio.R R/check.scsset.R R/check.tow.id.R R/check.tow.number.R R/gse.R R/msg.R R/scsset.R R/update.R README.md

build/.DS_Store

build/metadata.scs.cat.R build/nss 2018/2018.ns.load.ese.r build/nss 2018/comparative/2018.rvcomp.create.gulf.cards.r build/nss 2018/comparative/2018.rvcomp.load.ese.r build/nss 2018/comparative/2018.rvcomp.setup.r build/nss 2018/comparative/2018.verify.rvcomp.r build/nss 2019/2019.ns.create.gulf.cards.r build/nss 2019/2019.ns.load.ese.r build/nss 2019/2019.ns.setup.r

build/nss 2019/NSSurvey_Corrections_2019.Apr20.csv

build/nss 2019/NSSurvey_Corrections_2019.Apr20.xlsx

build/nss 2019/comparative/2019.rvcomp.create.gulf.cards.r build/nss 2019/comparative/2019.rvcomp.load.ese.r build/nss 2019/comparative/2019.rvcomp.setup.r build/nss 2019/comparative/2019.verify.rvcomp.r

build/nss 2019/nss.corrections.2019.tab

build/nss 2020/Data_Corrections_NS2020.xlsx

build/nss 2020/nss.2020.R build/nss.star.oddi.R build/nssbio.R build/nsscat.R build/nsslen.R build/nssset.R

build/oceanography/AZMP/azmp.Shediac_2016.csv

build/oceanography/AZMP/azmp.Shediac_2017.csv

build/oceanography/AZMP/azmp.Shediac_2018.csv

build/oceanography/AZMP/azmp.Shediac_2019.csv

build/oceanography/AZMP/azmp.Shediac_2020.csv

build/oceanography/AZMP/azmp.Shediac_2021.csv

build/oceanography/AZMP/azmp.Shediac_2022.csv

build/oceanography/AZMP/azmp.Shediac_2023.csv

build/oceanography/AZMP/build.azmp.R build/oceanography/water temperatures.R build/scs 1987/scs.set.1987.R

build/scs 1988/.DS_Store

build/scs 1988/README.md build/scs 1988/scs.scanmar.1988.R build/scs 1988/scs.set.1988.R

build/scs 1989/.DS_Store

build/scs 1989/scs.set.1989.R build/scs 1990/scs.set.1990.R build/scs 2020/esonar.2020.R build/scs 2020/scsbio.2020.R build/scs 2020/scscat.2020.R build/scs 2020/scslen.2020.R build/scs 2020/scsset.2020.R build/scs 2020/star.oddi.2020.R

build/scs.2021/data/scs.cat.2021.csv

build/scs.2021/data/scs.cat.2021.xlsx

build/scs.2021/data/scs.fish.measurements.2021.csv

build/scs.2021/data/scs.fish.measurements.2021.xlsx

build/scs.2021/esonar.2021.R build/scs.2021/scsbio.2021.R build/scs.2021/scscat.2021.R build/scs.2021/scslen.2021.R build/scs.2021/scsset.2021.R build/scs.2021/star.oddi.2021.R

build/scs.2022/data/scs.bio.2022.csv

build/scs.2022/data/scs.bio.2022.xlsx

build/scs.2022/data/scs.cat.2021.csv

build/scs.2022/data/scs.cat.2021.xlsx

build/scs.2022/data/scs.cat.2022.csv

build/scs.2022/data/scs.cat.2022.xlsx

build/scs.2022/data/scs.len.2022.csv

build/scs.2022/data/scs.len.2022.xlsx

build/scs.2022/data/scs.len.hyas.2022.csv

build/scs.2022/data/scs.len.hyas.2022.xlsx

build/scs.2022/data/scs.set.2022.csv

build/scs.2022/data/scs.set.2022.xlsx

build/scs.2022/data/scs.swept.area.2022.csv

build/scs.2022/esonar.2022.R build/scs.2022/scs.bio.2022.R build/scs.2022/scs.cat.2022.R build/scs.2022/scs.len.2022.R build/scs.2022/scs.len.hyas.2022.R build/scs.2022/scs.set.2022.R build/scs.2022/star.oddi.2022.R

build/scs.2023/data/scs.bio.2023.csv

build/scs.2023/data/scs.bio.2023.xlsx

build/scs.2023/data/scs.bio.hyas.2023.csv

build/scs.2023/data/scs.bio.hyas.2023.xlsx

build/scs.2023/data/scs.cat.2023.csv

build/scs.2023/data/scs.cat.2023.lobster.csv

build/scs.2023/data/scs.cat.2023.lobster.xlsx

build/scs.2023/data/scs.cat.2023.xlsx

build/scs.2023/data/scs.len.2023.csv

build/scs.2023/data/scs.len.2023.lobster.csv

build/scs.2023/data/scs.len.2023.lobster.xlsx

build/scs.2023/data/scs.len.2023.xlsx

build/scs.2023/data/scs.set.2023.csv

build/scs.2023/data/scs.set.2023.xlsx

build/scs.2023/data/scs.swept.area.2022.csv

build/scs.2023/data/scs.swept.area.2023.csv

build/scs.2023/esonar.2023.R build/scs.2023/scs.bio.2023.R build/scs.2023/scs.bio.hyas.2023.R build/scs.2023/scs.cat.2023.R build/scs.2023/scs.len.2023.R build/scs.2023/scs.set.2023.R build/scs.2023/star.oddi.2023.R build/scs.cat.1988-2002.R build/scs.star.oddi.R build/scsbio.R build/scscat.R build/scslen.R build/species.R build/species.foreign.R

doc/Data management practices for field studies.docx

doc/Data management practices.pptx

gulf.manage.Rproj

inst/.DS_Store

inst/extdata/.DS_Store

inst/extdata/Yves_snow_crab_set_data/.DS_Store

inst/extdata/Yves_snow_crab_set_data/2011/2011 door spread.xlsx

inst/extdata/Yves_snow_crab_set_data/2011/2011_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2011/2011_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2011/ByCatch_2011.xlsx

inst/extdata/Yves_snow_crab_set_data/2013/2013 door spread.xlsx

inst/extdata/Yves_snow_crab_set_data/2013/2013_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2013/2013_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2013/ByCatch_2013.xlsx

inst/extdata/Yves_snow_crab_set_data/2013/~$ByCatch_2013.xlsx

inst/extdata/Yves_snow_crab_set_data/2014/2014 door spread.xlsx

inst/extdata/Yves_snow_crab_set_data/2014/2014_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2014/2014_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2014/ByCatch_2014.xlsx

inst/extdata/Yves_snow_crab_set_data/2015/2015 door spread.xlsx

inst/extdata/Yves_snow_crab_set_data/2015/2015_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2015/2015_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2015/ByCatch_2015.xlsx

inst/extdata/Yves_snow_crab_set_data/2016/2016 door spread.xlsx

inst/extdata/Yves_snow_crab_set_data/2016/2016_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2016/2016_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2016/ByCatch_2016.xlsx

inst/extdata/Yves_snow_crab_set_data/2017/2017 door spread.xlsx

inst/extdata/Yves_snow_crab_set_data/2017/2017_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2017/2017_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2017/ByCatch_2017.xlsx

inst/extdata/Yves_snow_crab_set_data/2018/2018_Tow.xlsx

inst/extdata/Yves_snow_crab_set_data/2018/2018_Track file.xlsx

inst/extdata/Yves_snow_crab_set_data/2018/ByCatch_2018.xlsx

inst/extdata/metadata/scsbio.txt

inst/extdata/metadata/scscat.txt

inst/extdata/metadata/scslen.txt

inst/extdata/raw/.DS_Store

inst/extdata/raw/SCS1988C.csv

inst/extdata/raw/SCS1989C.csv

inst/extdata/raw/SCS1990C.csv

inst/extdata/raw/SCS1992C.csv

inst/extdata/raw/SCS1993C.csv

inst/extdata/raw/SCS1994C.csv

inst/extdata/raw/SCS1995C.csv

inst/extdata/raw/SCS1996C.csv

inst/extdata/raw/SCS1997C.csv

inst/extdata/raw/SCS1998C.csv

inst/extdata/raw/SCS1999C.csv

inst/extdata/raw/SCS2000C.csv

inst/extdata/raw/SCS2001C.csv

inst/extdata/raw/SCS2002C.csv

inst/extdata/raw/SCS2003C.csv

inst/extdata/raw/SCS2004C.csv

inst/extdata/raw/SCS2005C.csv

inst/extdata/raw/SCS2006C.csv

inst/extdata/raw/SCS2007C.csv

inst/extdata/raw/SCS2008C.csv

inst/extdata/raw/SCS2009C.csv

inst/extdata/raw/SCS2010C.csv

inst/extdata/raw/SCS2010L.csv

inst/extdata/raw/SCS2011C.csv

inst/extdata/raw/SCS2011L.csv

inst/extdata/raw/SCS2012C.csv

inst/extdata/raw/SCS2012L.csv

inst/extdata/raw/SCS2013C.csv

inst/extdata/raw/SCS2013L.csv

inst/extdata/raw/SCS2014C.csv

inst/extdata/raw/SCS2014L.csv

inst/extdata/raw/SCS2015C.csv

inst/extdata/raw/SCS2015L.csv

inst/extdata/raw/SCS2016C.csv

inst/extdata/raw/SCS2016L.csv

inst/extdata/raw/SCS2017C.csv

inst/extdata/raw/SCS2017L.csv

inst/extdata/raw/SCS2018C.csv

inst/extdata/raw/SCS2018L.csv

inst/extdata/raw/SCS2019C.csv

inst/extdata/raw/SCS2019L.csv

inst/extdata/raw/nss.ese.2020.rda

inst/extdata/raw/rvo022b.new

inst/extdata/raw/rvo022c.new

inst/extdata/raw/rvo022l.new

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inst/extdata/raw/rvo139c.new

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inst/extdata/raw/rvo637c.new

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inst/extdata/raw/rvp953b.new

inst/extdata/raw/rvp953c.new

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inst/extdata/raw/scs.bio.2020.csv

inst/extdata/raw/scs.cat.2020.csv

inst/extdata/raw/scs.cat.2021.csv

inst/extdata/raw/scs.len.2020.csv

inst/extdata/raw/scs.len.2021.csv

inst/extdata/raw/scs.liftoff.inits.2020.csv

inst/extdata/raw/scs.liftoff.time.2020.csv

inst/extdata/raw/scs.passive.phase.swept.area.2017-2019.csv

inst/extdata/raw/scs.set.2012.csv

inst/extdata/raw/scs.set.2020.csv

inst/extdata/raw/scs.start.end.times.csv

inst/extdata/raw/scs.swept.area.2020.csv

inst/extdata/raw/scs.touchdown.inits.2020.csv

inst/extdata/raw/scs.touchdown.time.2020.csv

inst/extdata/raw/species.foreign.csv

inst/extdata/raw/species.list.update.2020.csv

inst/extdata/raw/species.names.rda

inst/extdata/scs.1987/1987 Gulf Survey Log.doc

inst/extdata/scs.1987/1987 Survey Description.doc

inst/extdata/scs.1987/1987 Trawl Data.xls

inst/extdata/scs.1987/GCR87001.txt

inst/extdata/scs.1987/GCR87002.txt

inst/extdata/scs.1987/GCR87003.txt

inst/extdata/scs.1987/GCR87004.txt

inst/extdata/scs.1987/GCR87005.txt

inst/extdata/scs.1987/GCR87006.txt

inst/extdata/scs.1987/GCR87007.txt

inst/extdata/scs.1987/GCR87008.txt

inst/extdata/scs.1987/GCR87009.txt

inst/extdata/scs.1987/GCR87010.txt

inst/extdata/scs.1987/GCR87011.txt

inst/extdata/scs.1987/GCR87012.txt

inst/extdata/scs.1987/GCR87013.txt

inst/extdata/scs.1987/GCR87014.txt

inst/extdata/scs.1987/GCR87015.txt

inst/extdata/scs.1987/GCR87016.txt

inst/extdata/scs.1987/GCR87017.txt

inst/extdata/scs.1987/GCR87018.txt

inst/extdata/scs.1987/GCR87019.txt

inst/extdata/scs.1987/GCR87020.txt

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inst/extdata/scs.1987/GCR87060.txt

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inst/extdata/scs.1987/GCR87070.txt

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inst/extdata/scs.1987/GCR87072.txt

inst/extdata/scs.1987/GCR87073.txt

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inst/extdata/scs.1987/GCR87075.txt

inst/extdata/scs.1987/GCR87076.txt

inst/extdata/scs.1987/GCR87077.txt

inst/extdata/scs.1988/1988 Gulf Survey Log.doc

inst/extdata/scs.1988/1988 Survey Description.doc

inst/extdata/scs.1988/1988 Tow file.xlsx

inst/extdata/scs.1988/1988 Track file.xlsx

inst/extdata/scs.1988/1988 door spread.xlsx

inst/extdata/scs.1988/1988_By_catch_w_species.xlsx

inst/extdata/scs.1988/GCR88001.txt

inst/extdata/scs.1988/GCR88002.txt

inst/extdata/scs.1988/GCR88003.txt

inst/extdata/scs.1988/GCR88004.txt

inst/extdata/scs.1988/GCR88005.txt

inst/extdata/scs.1988/GCR88006.txt

inst/extdata/scs.1988/GCR88007.txt

inst/extdata/scs.1988/GCR88008.txt

inst/extdata/scs.1988/GCR88009.txt

inst/extdata/scs.1988/GCR88010.txt

inst/extdata/scs.1988/GCR88011.txt

inst/extdata/scs.1988/GCR88012.txt

inst/extdata/scs.1988/GCR88013.txt

inst/extdata/scs.1988/GCR88014.txt

inst/extdata/scs.1988/GCR88015.txt

inst/extdata/scs.1988/GCR88016.txt

inst/extdata/scs.1988/GCR88017.txt

inst/extdata/scs.1988/GCR88018.txt

inst/extdata/scs.1988/GCR88019.txt

inst/extdata/scs.1988/GCR88020.txt

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inst/extdata/scs.1993/1993 Survey Log.doc

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inst/extdata/scs.1993/1993 door spread.xlsx

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inst/extdata/scs.1994/beam trawl/1994 B Trawl Surv Desc.doc

inst/extdata/scs.1994/beam trawl/1994 B Trawl Surv Log.doc

inst/extdata/scs.1994/beam trawl/1994 Beam Trawl Log.doc

inst/extdata/scs.1994/beam trawl/1994 Beam Trawl Survey Description.doc

inst/extdata/scs.1994/beam trawl/1994 beam trawl.Track file.xlsx

inst/extdata/scs.1994/beam trawl/1994 beam trawl_Tow.xlsx

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inst/extdata/scs.1994/beam trawl/beam trawl_ByCatch_1994.xlsx

inst/extdata/scs.1994/scs.cat.1994.csv

inst/extdata/scs.1995/1995 Survey Description.doc

inst/extdata/scs.1995/1995 Survey Log.doc

inst/extdata/scs.1995/1995 door spread.xlsx

inst/extdata/scs.1995/1995_Tow.xlsx

inst/extdata/scs.1995/1995_Track file.xlsx

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inst/extdata/scs.1995/scs.cat.1995.csv

inst/extdata/scs.1996/1996 Survey Description.doc

inst/extdata/scs.1996/1996 Survey Log.doc

inst/extdata/scs.1996/1996 door spread.xlsx

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inst/extdata/scs.2002/Survey 2002 Files.doc

inst/extdata/scs.2002/scs.cat.2002.csv

inst/extdata/scs.2003/2003 Survey Description.doc

inst/extdata/scs.2003/2003 door spread.xlsx

inst/extdata/scs.2003/2003_Tow.xlsx

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inst/extdata/scs.2003/Survey 2003 Files.doc

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inst/extdata/scs.2004/Catchability/CATCHABILITY 2004 Description.doc

inst/extdata/scs.2004/Catchability/Catchabililty 2004 Files.doc

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inst/extdata/scs.2004/Survey/SURVEY 2004 Description.doc

inst/extdata/scs.2004/Survey/Scanmar Correction - Gulf 2004.xls

inst/extdata/scs.2004/Survey/Survey 2004 Files.doc

inst/extdata/scs.2005/2005 door spread.xlsx

inst/extdata/scs.2005/2005_Tow.xlsx

inst/extdata/scs.2005/2005_Track file.xlsx

inst/extdata/scs.2005/2005_capturabilité_Tow.xlsx

inst/extdata/scs.2005/2005_capturabilité_Track file.xlsx

inst/extdata/scs.2005/2005_selectivité_Tow.xlsx

inst/extdata/scs.2005/2005_selectivité_Track file.xlsx

inst/extdata/scs.2005/ByCatch_2005.xlsx

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inst/extdata/scs.2005/Catchability/CATCHABILITY 2005 Description.doc

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inst/extdata/scs.2005/Selectivity/SELECTIVITY 2005 Description.doc

inst/extdata/scs.2005/Selectivité_ByCatch_2005.xlsx

inst/extdata/scs.2005/Survey/.DS_Store

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inst/extdata/scs.2005/Survey/SURVEY 2005 Description.doc

inst/extdata/scs.2005/Survey/Survey 2005 Files.doc

inst/extdata/scs.2006/2006 door spread.xlsx

inst/extdata/scs.2006/2006_Tow.xlsx

inst/extdata/scs.2006/2006_Track file.xlsx

inst/extdata/scs.2006/August/GCR06076.txt

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inst/extdata/scs.2006/SURVEY 2006 Description.doc

inst/extdata/scs.2006/Survey 2006 Files.doc

inst/extdata/scs.2007/2007 door spread.xlsx

inst/extdata/scs.2007/2007_Tow.xlsx

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inst/extdata/scs.2007/SURVEY 2007 Description.doc

inst/extdata/scs.2007/Survey 2007 Files.doc

inst/extdata/scs.2008/2008 door spread.xlsx

inst/extdata/scs.2008/2008_Tow.xlsx

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inst/extdata/scs.2008/SURVEY 2008 Description.doc

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inst/extdata/scs.2009/SURVEY 2009 Description.doc

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inst/extdata/scs.2010/GCR10188.txt

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inst/extdata/scs.2010/GCR10230.txt

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inst/extdata/scs.2010/GCR10400.txt

inst/extdata/scs.2010/GCR10401.txt

inst/extdata/scs.2010/SURVEY 2010 Description.doc

inst/extdata/scs.2010/Survey 2010 Files.doc

inst/extdata/scs.2021/scs.bio.2021.csv

inst/extdata/scs.2021/scs.bio.2021.experiment.csv

inst/extdata/scs.2021/scs.bio.2021.experiment.xlsx

inst/extdata/scs.2021/scs.bio.2021.xlsx

inst/extdata/scs.2021/scs.set.2021.csv

inst/extdata/scs.2021/scs.set.2021.experiment.csv

inst/extdata/scs.2021/scs.set.2021.xlsx

inst/extdata/scs.2021/scs.swept.area.2021.csv

man/as.scsset.Rd man/check.Rd man/check.esonar.Rd man/check.key.Rd man/check.probe.Rd man/check.scsbio.Rd man/check.scsset.Rd man/check.tow.id.Rd man/check.tow.number.Rd man/gse.Rd man/msg.Rd man/update.Rd

request/.DS_Store

request/american.bank.R request/genevieve.cote.request.2023.R request/nss.gaspareau.R request/nss.open.data.R request/obis.R request/sc_extract_G_Cote_by_catch_abondance.R request/scs.open.data.2020-2021.R request/scs.open.data.2022.R

TobieSurette/gulf.manage documentation built on Feb. 10, 2024, 10:51 p.m.