R/UpgradeBioconductorPackages.R

In TomHarrop/rutils: Tom's R Utilities

#' UpgradeBioconductorPackages
#'
#' Source and run \code{https://bioconductor.org/biocLite.R}.
#'
#' @export

UpgradeBioconductorPackages <- function(){
  if(!exists("biocLite")){
    message("Sourcing biocLite()")
    source("https://bioconductor.org/biocLite.R")
  }
  message("Checking for updates to installed packages")
  biocLite(type = "source",
           dependencies=TRUE,
           build_vignettes=TRUE)
}