API for TomasettiLab/supersigs
Supervised mutational signatures
| Global functions | |
|---|---|
| SuperSig | Man page |
| SuperSig-class | Man page |
| add_counts | Source code |
| all_my_auc | Source code |
| binom_test_tree | Source code |
| children_of_feature | Source code |
| children_of_parent | Source code |
| condense_mutations | Source code |
| context_matters | Source code |
| convert_to_level3 | Source code |
| create_tree | Source code |
| example_dt | Man page |
| feature_engineering | Source code |
| feature_selection | Source code |
| features_to_labels | Source code |
| generate_min_sigma_algebra | Source code |
| get_signature | Man page Source code |
| getseq_wrapper | Source code |
| make_matrix | Man page Source code |
| median_n_star | Source code |
| my_auc | Source code |
| n_star_features | Source code |
| partial_signature | Man page Source code |
| predict_signature | Man page Source code |
| print.SuperSig | Source code |
| process_vcf | Man page Source code |
| rank_tri_features | Source code |
| repartition_with_rank | Source code |
| retest_tree | Source code |
| run_logit | Source code |
| select_n_adjust | Source code |
| simplify_signature | Man page Source code |
| supersig_ls | Man page |
| test_pruned_tree | Source code |
| transform_data | Source code |
| transform_to_iupac | Source code |
