generateAbundanceDF: Generate gene expression table or otu abundance table with...

In Tong-Chen/ImageGP: For ImageGP cloud platform (https://www.bic.ac.cn/BIC)

Generate gene expression table or otu abundance table with given samle information for test.

Description

Generate gene expression table or otu abundance table with given samle information for test.

Usage

generateAbundanceDF(
  type = "Gene",
  mean = 20,
  nGene = 15,
  nGrp = 2,
  nSample = 3
)

Arguments

type	Generate gene expression or OTU abundance. Only affect rownames.
mean	Mean value of abundance given to rnorm.
nGene	Number of genes or OTUs.
nGrp	Number of sample groups.
nSample	Number of sample replications for each group.
sd	Standard deviations given to rnorm.

Value

A dataframe.

Examples

df = generateAbundanceDF()

Tong-Chen/ImageGP documentation built on April 14, 2025, 12:54 p.m.