normalizedExpr2DistribBoxplot: Plot distribution of normalzied expression to check the...
In Tong-Chen/ImageGP: For ImageGP cloud platform (https://www.bic.ac.cn/BIC)
View source: R/transcriptome.R
normalizedExpr2DistribBoxplot R Documentation
Plot distribution of normalzied expression to check the normalization effect of DESeq2.
Description
Plot distribution of normalzied expression to check the normalization effect of DESeq2.
Usage
normalizedExpr2DistribBoxplot(normexpr, saveplot = NULL, ...)
Arguments
normexpr
A list returned by deseq2normalizedExpr.
saveplot
Save plot to given file "a.pdf", "b.png".
...
Additional parameters given to ggsave.
Value
A ggplot2 object
Examples
normexpr <- deseq2normalizedExpr(dds)
normalizedExpr2DistribBoxplo(normexpr)
Tong-Chen/ImageGP documentation built on April 14, 2025, 12:54 p.m.
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View source: R/transcriptome.R
| normalizedExpr2DistribBoxplot | R Documentation |
Plot distribution of normalzied expression to check the normalization effect of DESeq2.
Description
Plot distribution of normalzied expression to check the normalization effect of DESeq2.
Usage
normalizedExpr2DistribBoxplot(normexpr, saveplot = NULL, ...)
Arguments
normexpr |
A list returned by |
saveplot |
Save plot to given file "a.pdf", "b.png". |
... |
Additional parameters given to |
Value
A ggplot2 object
Examples
normexpr <- deseq2normalizedExpr(dds)
normalizedExpr2DistribBoxplo(normexpr)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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