get_aberrant_copy_number_per_sample: Make a table of aberrant copy number states for each...
In TransmissibleCancerGroup/dftdLowCov:
Description
Make a table of aberrant copy number states for each combination of CNV ID & sample ID.
'Aberrant' copy number is returned as NA if the CNV is not present in the sample, which
doesn't mean that the copy number is 0, it means that the copy number is not aberrant,
and is the inherited wild-type state of the DFTD founder Devil (most likely 2).
Usage
1
get_aberrant_copy_number_per_sample(cnv_table)
Arguments
cnv_table
data.table; Table of CNV information
TransmissibleCancerGroup/dftdLowCov documentation built on May 29, 2020, 7:23 p.m.
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Description
Make a table of aberrant copy number states for each combination of CNV ID & sample ID. 'Aberrant' copy number is returned as NA if the CNV is not present in the sample, which doesn't mean that the copy number is 0, it means that the copy number is not aberrant, and is the inherited wild-type state of the DFTD founder Devil (most likely 2).
Usage
1 | get_aberrant_copy_number_per_sample(cnv_table)
|
Arguments
cnv_table |
data.table; Table of CNV information |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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