rdm_window_analysis: Calculate the regime detection measured within a moving...

In TrashBirdEcology/regimeDetectionMeasures: Calculate Measures for Detecting Ecological Regimes

Description

This function is a wrapper for calculating various regime detection measures within a moving window.

Usage

rdm_window_analysis(dataInRDM, winMove = 0.25, min.window.dat = 2,
  fi.equation = "7.12", to.calc = c("VI", "FI", "EWS"), fill = 0)

Arguments

dataInRDM	A data frame with columns: sortVar: usually time or some spatial dimension; variable: usually species; value: observations about the variable (e.g., count)
winMove	The proportion of each time series to be included in the moving window. Default = 0.25 (or 25 percent of the observations).
min.window.dat	Used in calc_FisherInformation. Minimum # of data points in each window to include in calculations. Default = 2 data points
to.calc	Which measures to calculate. VI variance index. FI Fisher Information. EWS 1st through 4th moments, etc. Default = ALL measures.
fill	Used in the function _calculate_VI_. Fill value for missing data. Default = 0

TrashBirdEcology/regimeDetectionMeasures documentation built on Oct. 13, 2019, 5:15 p.m.